PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG044020.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 575aa MW: 62419.5 Da PI: 6.0809

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG044020.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.9	3.1e-16	476	514	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+C+CkkskClk+YCeCfaag++Cse C+C++C Nk TRIDC4AG044020.4 476 SCKRCSCKKSKCLKLYCECFAAGVYCSEPCSCQGCLNKP 514 689**********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MDTPDRAAAP AAARAEDSPL FSFIDSLSPI EPLKSAYSGN GLQAYHQSLN VTSVSSIFTS 60 PHHNAHKESK LSKGSFADYT ENELCMEEGT DKNKSPTSST AVRLFACTST ITRESHTMTT 120 CSVNEGIVDP PKGPNDLPQP GRFDSGSPDH NTAPCHGVSV RSDLKQDKCP KLEAVQTTNN 180 TVEKRKCLFS TDMQLQDGCQ PAKENNEVMG CEWDDLVSVT SGELLAFDSS MDQHHTGVQL 240 AVNNAESCGY LLSKLAGGAD ISDRTHPTTS SQAYYHEMVV GEDKAENGQL FPEDKKTILS 300 EEIQDNINEE NACIPLGCKV ETQQRGVRRR CLVFEAAGYS HRTVQKESAG DLSFSTCKGK 360 SSAQNHRNPG KTPSPHVFRG IGLHLNALAL TSKDKMACQD PLATALVPSL KTEQDVHGNL 420 LSAGGNFFHS GSGSLDLQMD NDDCSVGGFL GNDHNSSQSS SPPKKRRKSD NGDDDSCKRC 480 SCKKSKCLKL YCECFAAGVY CSEPCSCQGC LNKPIHEEIV LSTRKQIEFR NPLAFAPKVI 540 RMSEAGQETQ VGNFINKFIS TSVAHYTLLY DAETM

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MDTPDRAAAP AAARAEDSPL FSFIDSLSPI EPLKSAYSGN GLQAYHQSLN VTSVSSIFTS  60
PHHNAHKESK LSKGSFADYT ENELCMEEGT DKNKSPTSST AVRLFACTST ITRESHTMTT  120
CSVNEGIVDP PKGPNDLPQP GRFDSGSPDH NTAPCHGVSV RSDLKQDKCP KLEAVQTTNN  180
TVEKRKCLFS TDMQLQDGCQ PAKENNEVMG CEWDDLVSVT SGELLAFDSS MDQHHTGVQL  240
AVNNAESCGY LLSKLAGGAD ISDRTHPTTS SQAYYHEMVV GEDKAENGQL FPEDKKTILS  300
EEIQDNINEE NACIPLGCKV ETQQRGVRRR CLVFEAAGYS HRTVQKESAG DLSFSTCKGK  360
SSAQNHRNPG KTPSPHVFRG IGLHLNALAL TSKDKMACQD PLATALVPSL KTEQDVHGNL  420
LSAGGNFFHS GSGSLDLQMD NDDCSVGGFL GNDHNSSQSS SPPKKRRKSD NGDDDSCKRC  480
SCKKSKCLKL YCECFAAGVY CSEPCSCQGC LNKPIHEEIV LSTRKQIEFR NPLAFAPKVI  540
RMSEAGQETQ VGNFINKFIS TSVAHYTLLY DAETM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	463	469	PKKRRKS
2	464	468	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	7e-33	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG044020.4