PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG046680.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 162aa    MW: 17685.3 Da    PI: 6.556
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG046680.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB38.43e-12741352687
             NF-YB  26 kiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvyl 87 
                        + kda     e +  fi ++++ a+d c+  kr+tin++d++ al ++ f ++vepl++ l
  TRIDC4AG046680.3  74 IVNKDAMAAFAESARIFIHYLSATANDVCKDGKRQTINAEDVFKALDEIEFPEFVEPLRTAL 135
                       478999999*************************************************9866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MAGEAKEPEA AAQGEGSKPK TKAKKPKPAA APVPAMAEAE VEELPKAIVR RLVKDKLARA  60
ASGGEGAEGG AEVIVNKDAM AAFAESARIF IHYLSATAND VCKDGKRQTI NAEDVFKALD  120
EIEFPEFVEP LRTALEVVPV KNMFFEFRTL DRIQEHKYKL FK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.13e-29NF-YB family protein