PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG047140.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 231aa MW: 25382.2 Da PI: 5.4838

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG047140.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	117.7	6.7e-37	19	119	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+l+r+C+++Cvlap++++eq +++fa++hk+FGasn +kll++lp ++r++a+ ++ yeA+ar++dPvyG+v++i++lqqq+ +l+a TRIDC4AG047140.1 19 PCGACKFLGRRCVNGCVLAPHLCHEQgAAHFAAIHKVFGASNASKLLTSLPATDRREAAVTISYEAQARQHDPVYGCVAHIFALQQQVVNLQA 111 7***********************89************************************************************* PP DUF260 93 elallkee 100 +l++lk++ TRIDC4AG047140.1 112 QLESLKAQ 119 999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
EYTTSIDQVA GAMTGFSSPC GACKFLGRRC VNGCVLAPHL CHEQGAAHFA AIHKVFGASN 60 ASKLLTSLPA TDRREAAVTI SYEAQARQHD PVYGCVAHIF ALQQQVVNLQ AQLESLKAQE 120 PVQGYTNTCS VSSPEEDSMK AKVMAYEKGE ARMPHPGHSV KIERESYFGN DAMTSCTSMQ 180 YSQDYNSSHV YTPDYTASFK FNDESIHGST MFPVDMQDYL QENGYYDTEG L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42440.1	8e-50	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG047140.1