PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG049790.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CAMTA
Protein Properties Length: 118aa    MW: 14309.2 Da    PI: 9.5207
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG049790.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1113.61.1e-351511612114
               CG-1  12 eeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLe 103
                         ++++iL+n+e++ ++  ++++p+sgs++L +rk+ r++r DGy+w+k+ dgk+  E+he L v++v +l+cy  h e++ptfqrr+yw Le
  TRIDC4AG049790.11  15 VKVLEILQNYERFPIQ-YKTQKPPSGSWFLLDRKVHRFYRSDGYQWQKRMDGKSDYEAHEYLEVDNVRALNCYSGHVEKKPTFQRRIYWTLE 105
                        5799*********965.56789********************************************************************** PP

               CG-1 104 eelekivlvhy 114
                         +  +  + hy
  TRIDC4AG049790.11 106 PQNPHSTICHY 116
                        **999999999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
QNASNRFLFS LFATVKVLEI LQNYERFPIQ YKTQKPPSGS WFLLDRKVHR FYRSDGYQWQ  60
KRMDGKSDYE AHEYLEVDNV RALNCYSGHV EKKPTFQRRI YWTLEPQNPH STICHYNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.16e-30CAMTA family protein