PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG050170.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 414aa MW: 46262.4 Da PI: 9.4488

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG050170.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	120.7	7e-38	315	413	3	103
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 k + wlk++e++ iLen+e++ + ++++++p sgsl+L nr+ r+frkDG++w+k k+g E+h++LKvg+v++l+cyYa +++np fq TRIDC4AG050170.5 315 KAMSCWLKPSEVLYILENYERFWIPSKTPNKPASGSLFLQNRRLNRFFRKDGHEWRKNKNGG--LEAHKRLKVGNVDALSCYYAYGRKNPYFQ 405 34788*****************************************************96..6************************ PP CG-1 96 rrcywlLe 103 rrcyw+Le TRIDC4AG050170.5 406 RRCYWMLE 413 *****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
YFDIGTNSME TLQRLGKLTN LQDLQLTIHT LPSENLKNNM LCLGSILCKL SNLKSLTLAP 60 VGVGSSCINC QNVAVGERMI ISGDDLSNVS SPQALLQRLK LSSRVCIFSS LPKWVGHLCK 120 LSILKIGVSE LTGNDVEVLR GLPALTALSL YVCTKLAEQI VFNKAGFSVI RYFKFQCSVP 180 WLKFEAGAMP NLRKLKLGFN SSGVDQHGTA AIIIEQLSGL EDISAEIGGA GIDWESVLAN 240 TIRNHPSNPR INIQLKDCTF YGHTSMGTKQ KGHMNKNDNS GEDEKKQADS GVFTLSESSS 300 RLHISGFDME VLLKKAMSCW LKPSEVLYIL ENYERFWIPS KTPNKPASGS LFLQNRRLNR 360 FFRKDGHEWR KNKNGGLEAH KRLKVGNVDA LSCYYAYGRK NPYFQRRCYW MLEP

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

YFDIGTNSME TLQRLGKLTN LQDLQLTIHT LPSENLKNNM LCLGSILCKL SNLKSLTLAP  60
VGVGSSCINC QNVAVGERMI ISGDDLSNVS SPQALLQRLK LSSRVCIFSS LPKWVGHLCK  120
LSILKIGVSE LTGNDVEVLR GLPALTALSL YVCTKLAEQI VFNKAGFSVI RYFKFQCSVP  180
WLKFEAGAMP NLRKLKLGFN SSGVDQHGTA AIIIEQLSGL EDISAEIGGA GIDWESVLAN  240
TIRNHPSNPR INIQLKDCTF YGHTSMGTKQ KGHMNKNDNS GEDEKKQADS GVFTLSESSS  300
RLHISGFDME VLLKKAMSCW LKPSEVLYIL ENYERFWIPS KTPNKPASGS LFLQNRRLNR  360
FFRKDGHEWR KNKNGGLEAH KRLKVGNVDA LSCYYAYGRK NPYFQRRCYW MLEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.3	4e-32	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG050170.5