PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG050170.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CAMTA
Protein Properties Length: 207aa    MW: 23285.7 Da    PI: 6.152
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG050170.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1109.12.7e-3488636116
              CG-1  36 sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhyle 116
                        gsl+L nr+  r+frkDG++w+k k+g    E+h++LKvg+v++l+cyYa +++np fqrrcyw+Le ++++ivlvhy++
  TRIDC4AG050170.6   8 GGSLFLQNRRLNRFFRKDGHEWRKNKNGG--LEAHKRLKVGNVDALSCYYAYGRKNPYFQRRCYWMLEPAYDHIVLVHYMS 86 
                       69*************************96..6***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
YNSTISLGGS LFLQNRRLNR FFRKDGHEWR KNKNGGLEAH KRLKVGNVDA LSCYYAYGRK  60
NPYFQRRCYW MLEPAYDHIV LVHYMSIAEG NSNLSCVTEV SSSLQTCGVT ETGQSYSNLS  120
SVTEVSSRSA SKESNYNVGM LDYNIGIPDC NIVMPEAQER GQSSVEHTNE ARPKDDRGLT  180
EALEAIANHL LGDDDNGHIY NSDQSQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.19e-26CAMTA family protein