PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG051580.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 760aa MW: 86550.4 Da PI: 7.1607

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG051580.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.5	9e-18	11	95	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA ++GF v+++ks+ + + g + + +vC+++g+ +e+ + r++ +t+C+a+++ +++ dg ++t+++l+HnH+l+p TRIDC4AG051580.4 11 NFYKRYALRTGFGVCVKKSSFT-KAGLCRRLLLVCNRWGNGKEDACY-----QARPTAKTNCQATVVARLWGDGMLHLTDVSLDHNHPLNP 95 6***************9998.6777************9999.....999*******************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 760 aa Download sequence
MVFKSYEEVL NFYKRYALRT GFGVCVKKSS FTKAGLCRRL LLVCNRWGNG KEDACYQARP 60 TAKTNCQATV VARLWGDGML HLTDVSLDHN HPLNPSAARF LRCYKTLPSG MSKDLVVRAA 120 RGECATSGGD VEAPPMFDDW GRLKIREGDV QAINGFFAEM QAKQPNFFYV MDFYVEGHLR 180 SVLWADSRSR EAYQYFSDAI WVDTTCLRSK FNVPLVLFLG VNHHGQLVLL GCGLLSDEST 240 ESFLWLFKAW LTCMKGRLPG AMITDESVAI KAAVREVFPK TRHRISDWHI VRSIAEKLGE 300 LPEYESIKVQ MEAVIYGSLK DDQFETRWKN LINRFSLQDN EWIIFLYENR HLWVPSFLKD 360 AFWAGLSVNH RESPGAFFDG SVSHETTLVS FLSNYMILVQ YKHKMEQQDD FESLTSGRVL 420 VSKFPMEEQI SKLYTLNMFV KFQDELKSTL DCQVQQVSPS SFVVIDLAEQ GTGLVTRKYE 480 VVHCMETNRM ECNCGLFQFS GIVCRHALSV LKWQQVYDIP PCYVLNRWRS DFKQLHALDN 540 PLKDPLVSSN HVERYDHISL QCLRLVEIGM VSDDKYQHAL KLISDMKRTL LDDNLCRELE 600 QKMSPPERAI VVNGDSHAQP GSSEGGPAKK RRGRPPKKSK EISAESVSNQ CGNKESLLVS 660 SDVSQKGALH SSSTASNLGT HVRAHGVDDL MEEVNANEVS FESRYGVQSS HPNHYGDQLH 720 PSHTLQFGQH MPSAEQSRGV EWVYPTIYQD DQVPYDRRTS

Sequence ? help Back to Top

Protein Sequence Length: 760 aa Download sequence

MVFKSYEEVL NFYKRYALRT GFGVCVKKSS FTKAGLCRRL LLVCNRWGNG KEDACYQARP  60
TAKTNCQATV VARLWGDGML HLTDVSLDHN HPLNPSAARF LRCYKTLPSG MSKDLVVRAA  120
RGECATSGGD VEAPPMFDDW GRLKIREGDV QAINGFFAEM QAKQPNFFYV MDFYVEGHLR  180
SVLWADSRSR EAYQYFSDAI WVDTTCLRSK FNVPLVLFLG VNHHGQLVLL GCGLLSDEST  240
ESFLWLFKAW LTCMKGRLPG AMITDESVAI KAAVREVFPK TRHRISDWHI VRSIAEKLGE  300
LPEYESIKVQ MEAVIYGSLK DDQFETRWKN LINRFSLQDN EWIIFLYENR HLWVPSFLKD  360
AFWAGLSVNH RESPGAFFDG SVSHETTLVS FLSNYMILVQ YKHKMEQQDD FESLTSGRVL  420
VSKFPMEEQI SKLYTLNMFV KFQDELKSTL DCQVQQVSPS SFVVIDLAEQ GTGLVTRKYE  480
VVHCMETNRM ECNCGLFQFS GIVCRHALSV LKWQQVYDIP PCYVLNRWRS DFKQLHALDN  540
PLKDPLVSSN HVERYDHISL QCLRLVEIGM VSDDKYQHAL KLISDMKRTL LDDNLCRELE  600
QKMSPPERAI VVNGDSHAQP GSSEGGPAKK RRGRPPKKSK EISAESVSNQ CGNKESLLVS  660
SDVSQKGALH SSSTASNLGT HVRAHGVDDL MEEVNANEVS FESRYGVQSS HPNHYGDQLH  720
PSHTLQFGQH MPSAEQSRGV EWVYPTIYQD DQVPYDRRTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-118	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG051580.4