PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG051580.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 787aa MW: 88145.2 Da PI: 6.4734

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG051580.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.5	9.4e-18	111	195	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA ++GF v+++ks+ + + g + + +vC+++g+ +e+ + r++ +t+C+a+++ +++ dg ++t+++l+HnH+l+p TRIDC4AG051580.7 111 NFYKRYALRTGFGVCVKKSSFT-KAGLCRRLLLVCNRWGNGKEDACY-----QARPTAKTNCQATVVARLWGDGMLHLTDVSLDHNHPLNP 195 6***************9998.6777************9999.....999*******************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 787 aa Download sequence
ARHQLASGQA QAQYCPPTDS LGPAPVSPVS KGLAAMADLI PGEGELAFGG NQDDDDAEDA 60 SPGSKELAAM VEAAAAASVE LDAAADRAPP YGDDRTPRDG MVFKSYEEVL NFYKRYALRT 120 GFGVCVKKSS FTKAGLCRRL LLVCNRWGNG KEDACYQARP TAKTNCQATV VARLWGDGML 180 HLTDVSLDHN HPLNPSAARF LRCYKTLPSG MSKDLVVRAA RGECATSGGD VEAPPMFDDW 240 GRLKIREGDV QAINGFFAEM QAKQPNFFYV MDFYVEGHLR SVLWADSRSR EAYQYFSDAI 300 WVDTTCLRSK FNVPLVLFLG VNHHGQLVLL GCGLLSDEST ESFLWLFKAW LTCMKGRLPG 360 AMITDESVAI KAAVREVFPK TRHRISDWHI VRSIAEKLGE LPEYESIKVQ MEAVIYGSLK 420 DDQFETRWKN LINRFSLQDN EWIIFLYENR HLWVPSFLKD AFWAGLSVNH RESPGAFFDG 480 SVSHETTLVS FLSNYMILVQ YKHKMEQQDD FESLTSGRVL VSKFPMEEQI SKLYTLNMFV 540 KFQDELKSTL DCQVQQVSPS SFVVIDLAEQ GTGLVTRKYE VVHCMETNRM ECNCGLFQFS 600 GIVCRHALSV LKWQQVYDIP PCYVLNRWRS DFKQLHALDN PLKDPLVSSN HVERYDHISL 660 QCLRLVEIGM VSDDKYQHAL KLISDMKRTL LDDNLCRELE QKMSPPERAI VVNGDSHAQP 720 GSSEGGPAKK RRGRPPKKSK EISAESVESL LVSSDVSQKG ALHSSSTASN LGTHVRAHGV 780 DDLMNDL

Sequence ? help Back to Top

Protein Sequence Length: 787 aa Download sequence

ARHQLASGQA QAQYCPPTDS LGPAPVSPVS KGLAAMADLI PGEGELAFGG NQDDDDAEDA  60
SPGSKELAAM VEAAAAASVE LDAAADRAPP YGDDRTPRDG MVFKSYEEVL NFYKRYALRT  120
GFGVCVKKSS FTKAGLCRRL LLVCNRWGNG KEDACYQARP TAKTNCQATV VARLWGDGML  180
HLTDVSLDHN HPLNPSAARF LRCYKTLPSG MSKDLVVRAA RGECATSGGD VEAPPMFDDW  240
GRLKIREGDV QAINGFFAEM QAKQPNFFYV MDFYVEGHLR SVLWADSRSR EAYQYFSDAI  300
WVDTTCLRSK FNVPLVLFLG VNHHGQLVLL GCGLLSDEST ESFLWLFKAW LTCMKGRLPG  360
AMITDESVAI KAAVREVFPK TRHRISDWHI VRSIAEKLGE LPEYESIKVQ MEAVIYGSLK  420
DDQFETRWKN LINRFSLQDN EWIIFLYENR HLWVPSFLKD AFWAGLSVNH RESPGAFFDG  480
SVSHETTLVS FLSNYMILVQ YKHKMEQQDD FESLTSGRVL VSKFPMEEQI SKLYTLNMFV  540
KFQDELKSTL DCQVQQVSPS SFVVIDLAEQ GTGLVTRKYE VVHCMETNRM ECNCGLFQFS  600
GIVCRHALSV LKWQQVYDIP PCYVLNRWRS DFKQLHALDN PLKDPLVSSN HVERYDHISL  660
QCLRLVEIGM VSDDKYQHAL KLISDMKRTL LDDNLCRELE QKMSPPERAI VVNGDSHAQP  720
GSSEGGPAKK RRGRPPKKSK EISAESVESL LVSSDVSQKG ALHSSSTASN LGTHVRAHGV  780
DDLMNDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-119	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG051580.7