PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG052860.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 301aa    MW: 32933 Da    PI: 8.2606
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG052860.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.92e-06115137123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       + C+ Cgk F+r  nL+ H+r H
  TRIDC4AG052860.3 115 HCCKVCGKGFKRDANLRMHMRGH 137
                       569******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
TYLTFLEHKV GQLRGILCSA PRHPQQQRAI VSAELRCIIV QLSSIANDLA SDSGAGAADV  60
APYEPSEERS PSLSDATHDD SDDHAGADDG GEEEGEGPYE VVQIEKEAIL APHAHCCKVC  120
GKGFKRDANL RMHMRGHGDQ YKAPGALARP GSPAPGAGTE RRFFYSCPYA GCKRNREHRD  180
FQPLKTPVCV KNHYRRSHCD KSHVCCRCGV KRFSVLADLR THEKHCGRDR WVCSCGVSFS  240
RKDKLFAHVA IFDGGHTPAL PPSDDEATGH CTAATATATA INKLLRSNAR RSQLLRRQSG  300
H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.32e-81C2H2 family protein