PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG052990.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 325aa MW: 35159.7 Da PI: 6.3738

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG052990.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45	1.9e-14	141	187	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR++iN +f eL +++P + kK++Ka+iL Av+Y+k+ q TRIDC4AG052990.1 141 EHVMAERKRREKINRRFIELSTVIPGL-----KKMDKATILSDAVRYVKEQQ 187 699**********************.....9**************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MDDSNMFIQW AMETLEQEQD GAATGHVFPS SVLELDNSAA PQNGTHMAAY RHRATDSWSS 60 GDSGAAVAVE NDGWSSNCST NHPAASWNFT SVIPHPPSII EEATPSPPAA PSHVVPEMAQ 120 RSPQSRKSSG ASTGMVPTVQ EHVMAERKRR EKINRRFIEL STVIPGLKKM DKATILSDAV 180 RYVKEQQEKL KALQDRDVRS IDSVVLVKRP CISNSDDGCP SPPPSAAAGG GPPTTRIPLP 240 EIEARISESN VLVRIHCLDG KGVLVMLLAE VEGLHLSITH TNVVSFPAST LIINLMAKVD 300 EGFTVTADDI VWKLDSALRR HHSGK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	146	151	ERKRRE
2	147	152	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	4e-38	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG052990.1