PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG052990.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 178aa    MW: 19345.5 Da    PI: 6.6002
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG052990.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.22.9e-08141167430
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
               HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                        h ++Er+RR++iN +f eL +++P +
  TRIDC4AG052990.2 141 EHVMAERKRREKINRRFIELSTVIPGL 167
                       699**********************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MDDSNMFIQW AMETLEQEQD GAATGHVFPS SVLELDNSAA PQNGTHMAAY RHRATDSWSS  60
GDSGAAVAVE NDGWSSNCST NHPAASWNFT SVIPHPPSII EEATPSPPAA PSHVVPEMAQ  120
RSPQSRKSSG ASTGMVPTVQ EHVMAERKRR EKINRRFIEL STVIPGLKKV CTVHFSHK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146151ERKRRE
2147152RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.12e-09bHLH family protein