PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG053220.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 358aa MW: 37345.6 Da PI: 6.5754

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG053220.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	117.6	1.6e-36	76	175	6	98
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ka 90 r+ ++hTkv+gR+RR+R++a caar+F+L++eLG+++d++t+ WLlqq++pai ++tgt++ +a ++ +++ + ++ss+ ++ TRIDC4AG053220.2 76 PRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETVRWLLQQSEPAIVAATGTGTVPAIAT-TVDGVLRIPTQSSSsassavvdDE 167 6999********************************************************88888444.222222222222221122222222 PP TCP 91 aksaaksk 98 a+++ +k TRIDC4AG053220.2 168 ASAKRRRK 175 22222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
AAPRRGICPA VMESEGQDRP PGERDAHAHA GGVAEPGAMA MVPVPVRGGY MVVPKPEPVE 60 LFGAGGGGMV VRKPPPRNRD RHTKVEGRGR RIRMPAACAA RIFQLTRELG HKSDGETVRW 120 LLQQSEPAIV AATGTGTVPA IATTVDGVLR IPTQSSSSAS SAVVDDEASA KRRRKLQPTR 180 AAGPHATVPP TAAYYSVLAD PLLQGGAGGA AISVASGLAP IGGQQGLVPV FAVPSAAAAA 240 GGNHMIPQAT AVWMVPQPAG APNQPTQYWA FQSAPQLINL AGAQTMPAGA VFPNVAADYH 300 QQRQSASTVV QNTNSDHQQF SHHLTGAESH EQQRRDHHPE EDDADDDDEP VSDSSPED

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

AAPRRGICPA VMESEGQDRP PGERDAHAHA GGVAEPGAMA MVPVPVRGGY MVVPKPEPVE  60
LFGAGGGGMV VRKPPPRNRD RHTKVEGRGR RIRMPAACAA RIFQLTRELG HKSDGETVRW  120
LLQQSEPAIV AATGTGTVPA IATTVDGVLR IPTQSSSSAS SAVVDDEASA KRRRKLQPTR  180
AAGPHATVPP TAAYYSVLAD PLLQGGAGGA AISVASGLAP IGGQQGLVPV FAVPSAAAAA  240
GGNHMIPQAT AVWMVPQPAG APNQPTQYWA FQSAPQLINL AGAQTMPAGA VFPNVAADYH  300
QQRQSASTVV QNTNSDHQQF SHHLTGAESH EQQRRDHHPE EDDADDDDEP VSDSSPED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	6e-46	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG053220.2