PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG053380.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 146aa    MW: 17017.1 Da    PI: 6.1667
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG053380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.71.8e-1735129299
                       EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                       +  ++++ +++s ++ +pk+f+ e+        +   +l de   ++ + ++   ++k ++y+l kGW++F+ +++L +gD +vF++++r +f
  TRIDC4AG053380.1  35 VRPMSHECATRSILMQIPKHFI-EYlpA----HDEAAVLVDEADDEFHMMYNAhrKGKHCHYYLDKGWRRFAADHDLADGDCLVFHMTERVKF 122
                       566777777888999*******.66332....44579**************7744555555*************************8776666 PP

                       ..EEEEE-S CS
                B3  91 elvvkvfrk 99 
                         +v +fr+
  TRIDC4AG053380.1 123 --KVYIFRA 129
                       ..9999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
YAASKTPTAE ERAGAVAKAE ELKRRIHRIR CPAFVRPMSH ECATRSILMQ IPKHFIEYLP  60
AHDEAAVLVD EADDEFHMMY NAHRKGKHCH YYLDKGWRRF AADHDLADGD CLVFHMTERV  120
KFKVYIFRAN PDYESDQTSD DSDDEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.15e-14B3 family protein