PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG053380.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 188aa    MW: 21542.6 Da    PI: 7.6207
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG053380.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.15.1e-1668158293
                       EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                       +  ++++ +++s ++ +pk+f+ e+        +   +l de   ++ + ++   ++k ++y+l kGW++F+ +++L +gD +vF++++r +f
  TRIDC4AG053380.2  68 VRPMSHECATRSILMQIPKHFI-EYlpA----HDEAAVLVDEADDEFHMMYNAhrKGKHCHYYLDKGWRRFAADHDLADGDCLVFHMTERVKF 155
                       556677777888899*******.66332....44579**************7744555555*************************8887777 PP

                       ..E CS
                B3  91 elv 93 
                       ++v
  TRIDC4AG053380.2 156 KFV 158
                       554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
GDLRRSGRVA GLPEQPNYLE GALQRDYRGV YEAYAASKTP TAEERAGAVA KAEELKRRIH  60
RIRCPAFVRP MSHECATRSI LMQIPKHFIE YLPAHDEAAV LVDEADDEFH MMYNAHRKGK  120
HCHYYLDKGW RRFAADHDLA DGDCLVFHMT ERVKFKFVGE ARSPLMLESA TAISCWLRVE  180
LQSQTLPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.19e-10B3 family protein