PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG053380.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 170aa    MW: 19552.2 Da    PI: 7.4153
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG053380.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3551.5e-1754146196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k +t++ ++k + + +pk+f  e+ + + e+  ++l de   ++ + ++  +++++y++ kGW++F+  ++L +gD +vF++++r +f+ +
  TRIDC4AG053380.6  54 FVKPMTHNCASKAAEMKIPKHFS-EYLLAHDEG--VVLVDEADDEFHMMYNAHRQGRHYYFHKGWRGFAANHDLAVGDCLVFHMTERAKFKVR 143
                       8999*99***************8.885554455..***************88888888*************************9888888777 PP

                       EEE CS
                B3  94 vkv 96 
                       +++
  TRIDC4AG053380.6 144 FSI 146
                       776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
EQPSYLEGAG QRDYRGVYEA YAVWKGPTEE ERAGAIAKAE ELQRRIHRIR CPAFVKPMTH  60
NCASKAAEMK IPKHFSEYLL AHDEGVVLVD EADDEFHMMY NAHRQGRHYY FHKGWRGFAA  120
NHDLAVGDCL VFHMTERAKF KVRFSISSIP WINSPDFLLL GTPHSVPVHI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.12e-16B3 family protein