PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG053450.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 168aa    MW: 19532 Da    PI: 6.4188
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG053450.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3536.4e-1758151199
                       EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                       f+k++t+  +++ + +++p +f+e+        +  ++l +e   ++++ ++ +k++++ +l+kGW+eF+  ++L+ gD +vF+l+++  f  
  TRIDC4AG053450.5  58 FVKTMTHVCASRAKPMMIPTHFIEHLpA----HDEAVVLVNEADVEFKMLCSASKQGRHRYLSKGWREFAVHHDLENGDCLVFHLIESAMF-- 144
                       899999999999999********55532....3457***************999999999************************9986555.. PP

                       EEEEE-S CS
                B3  93 vvkvfrk 99 
                       +v +fr+
  TRIDC4AG053450.5 145 KVYIFRA 151
                       9999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
LPEQPNYLKG AQQRDYEEVY AAYDARIWKG PTDEQRAAAV AKAEELRRRI HRIRRPAFVK  60
TMTHVCASRA KPMMIPTHFI EHLPAHDEAV VLVNEADVEF KMLCSASKQG RHRYLSKGWR  120
EFAVHHDLEN GDCLVFHLIE SAMFKVYIFR ANPDYESDQT SDDSEDEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.13e-17B3 family protein