PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG053710.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 149aa MW: 16262.1 Da PI: 9.2041

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG053710.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.5	1.4e-41	54	131	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC adls ak+yhrrhkvCe+h+ka++++v ++ qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ TRIDC4AG053710.8 54 ACQVEGCCADLSAAKDYHRRHKVCEMHAKANTAVVGNTVQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTRP 131 5**************************************************************************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence
EKDEGPVGSS NNVLSLRIGG NSVAGGAVED GGVNEEDRNG KKIRVQGGSS SGPACQVEGC 60 CADLSAAKDY HRRHKVCEMH AKANTAVVGN TVQRFCQQCS RFHLLQEFDE GKRSCRRRLA 120 GHNKRRRKTR PENAVGGTPI EEKLHHESR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	4e-47	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG053710.8