PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG054420.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 161aa    MW: 17371.9 Da    PI: 10.5613
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG054420.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.51e-192862135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C+ C+ttkTplWR gp+g+ +LCnaCG++yrkk++
  TRIDC4AG054420.2 28 CTACNTTKTPLWRGGPSGPMSLCNACGIRYRKKRR 62
                      ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
CFASICWQGS GSLDPGERPA AGSQPKACTA CNTTKTPLWR GGPSGPMSLC NACGIRYRKK  60
RREAMGLEDP PKKRQPAAAA APAACSEAGG ESADPEQQQP QQAKKTTTTT KRGREVELRV  120
VGFGKEVVLK QRRRMRRRQR LGEEEKAAIL LMALSSGVIY G
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1131137QRRRMRR
2132138RRRMRRR
3133139RRRMRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.11e-22GATA family protein