PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG054420.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GATA

Protein Properties

Length: 157aa MW: 16848.3 Da PI: 10.8421

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG054420.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	61.6	9.7e-20	27	61	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ C+ttkTplWR gp+g+ +LCnaCG++yrkk++ TRIDC4AG054420.3 27 CTACNTTKTPLWRGGPSGPMSLCNACGIRYRKKRR 61 ********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence
MSSSVEKGSG SLDPGERPAA GSQPKACTAC NTTKTPLWRG GPSGPMSLCN ACGIRYRKKR 60 REAMGLEDPP KKRQPAAAAA PAACSEAGGE SADPEQQQPQ QAKKTTTTTK RGREVELRVV 120 GFGKEVVLKQ RRRMRRRQRL GEEEKAAILL MALSSGV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	136	QRRRMRR
2	131	137	RRRMRRR
3	132	138	RRRMRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06740.1	6e-23	GATA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG054420.3