PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG055210.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 145aa    MW: 15496.1 Da    PI: 10.7526
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG055210.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.99.2e-4016115199
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 
                       +C aCk+lrrkCa++Cv+apyf++eq +++fa++hk+FGasnv+kll++lp  +r +a+ ++ yeA+ar+rdPvyG+v++i++lqqq+++l+a
  TRIDC4AG055210.1  16 PCGACKFLRRKCARGCVFAPYFCHEQgAAHFAAIHKVFGASNVSKLLAHLPIADRAEAAVTVSYEAQARLRDPVYGCVAHIFALQQQVMTLQA 108
                       7*************************89***************************************************************** PP

            DUF260  93 elallke 99 
                       +la+lk+
  TRIDC4AG055210.1 109 QLASLKA 115
                       **99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
AIITGRLMSM TGLGSPCGAC KFLRRKCARG CVFAPYFCHE QGAAHFAAIH KVFGASNVSK  60
LLAHLPIADR AEAAVTVSYE AQARLRDPVY GCVAHIFALQ QQVMTLQAQL ASLKASSART  120
AAMAAPRPGT TPSPRCWPGR RPRTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.15e-58LBD family protein