PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG055210.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 245aa MW: 25613.4 Da PI: 6.4966

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG055210.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	125	3.8e-39	9	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrrkCa++Cv+apyf++eq +++fa++hk+FGasnv+kll++lp +r +a+ ++ yeA+ar+rdPvyG+v++i++lqqq+++l+a TRIDC4AG055210.3 9 PCGACKFLRRKCARGCVFAPYFCHEQgAAHFAAIHKVFGASNVSKLLAHLPIADRAEAAVTVSYEAQARLRDPVYGCVAHIFALQQQVMTLQA 101 7***********************89************************************************************* PP DUF260 93 elallkee 100 +la+lk++ TRIDC4AG055210.3 102 QLASLKAH 109 *99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MSMTGLGSPC GACKFLRRKC ARGCVFAPYF CHEQGAAHFA AIHKVFGASN VSKLLAHLPI 60 ADRAEAAVTV SYEAQARLRD PVYGCVAHIF ALQQQVMTLQ AQLASLKAHA APAPQGMQHQ 120 DDVKGYVGGG AADQYGHGGA YQWHNGLGVG AAAAQQQCAY GGNGGAAAGH DSITALLAGS 180 AASDYMMYHA LEQSASDDDG HAAAAGFETA DQSSFGTEES GWRSSSRYQD CEDLQSVAYA 240 YLNRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58190.1	4e-62	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG055210.3