PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG055220.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 189aa    MW: 20095.3 Da    PI: 6.7715
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG055220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.21.3e-38161161100
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 
                       +C aCk+lrr+Ca++Cv+apyf+ae+ +++fa++hk+FGasn  kll+++ + +r++a+++++yeA+ar+rdPvyG+v++i++lqqq++ l+a
  TRIDC4AG055220.1  16 PCGACKFLRRRCAAECVFAPYFCAEDgASQFAAIHKVFGASNAAKLLQQVAPGDRSEAAATVTYEAQARLRDPVYGCVAHIFALQQQVAALQA 108
                       7***********************9989***************************************************************** PP

            DUF260  93 elallkee 100
                       ++a+++++
  TRIDC4AG055220.1 109 QVAHARTQ 116
                       ***99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
DRTTMAGAGV TTTGSPCGAC KFLRRRCAAE CVFAPYFCAE DGASQFAAIH KVFGASNAAK  60
LLQQVAPGDR SEAAATVTYE AQARLRDPVY GCVAHIFALQ QQVAALQAQV AHARTQAHLG  120
PAATAMHPLL QQQLQQQAWQ VAEQHDHQSM TSTQSSSGCY SGAHQRSDGS SLHGAEMYCG  180
YGEQEEGSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.15e-43LBD family protein