PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG055490.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 190aa MW: 20605.2 Da PI: 9.0755

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG055490.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.1	8.6e-08	14	54	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+teEd +++G g+W+ I+r g R +k+c++rw++yl TRIDC4AG055490.1 14 RGPWSTEED-------AKHGLGRWSDIPRLAGIERGGKSCRLRWLNYL 54 799999999.......58999*******6699********97 PP
2	Myb_DNA-binding	38.4	2.9e-12	64	102	5	45
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++eE++l+++++ G+ W++Ia++++ gRt++ +k++w+ TRIDC4AG055490.1 64 SQEEEDLIIQLHSIIGNS-WTLIAACLP-GRTDNGVKNFWN 102 89************99.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MSKAPRGPRK PATRGPWSTE EDAKHGLGRW SDIPRLAGIE RGGKSCRLRW LNYLRPDLKR 60 AALSQEEEDL IIQLHSIIGN SWTLIAACLP GRTDNGVKNF WNASIKHKLR RRGIDPDTHE 120 PVVDEGSRNG DAQYILPSHL EAGSNACSHG ALSPDAAGLH HSLRGHGPAA APAWRCTCTA 180 GGVELQHGGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	2e-49	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG055490.1