PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG055740.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GATA

Protein Properties

Length: 171aa MW: 18128.7 Da PI: 11.7795

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG055740.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	54.1	2.1e-17	56	90	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++C + Tp+WR+gp g+++LCnaCG++y+ +l TRIDC4AG055740.2 56 CTHCASEVTPQWRQGPLGPRSLCNACGVRYKTGRL 90 *******************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MAVEAVEEVP EPAPAAPSGR PAVGPRTKGR RRRVTAPWNL AQPPTLPPPL PAARRCTHCA 60 SEVTPQWRQG PLGPRSLCNA CGVRYKTGRL LPEYRPANSP TFSPLLHSNS HRRVMQIRLR 120 SESEGEGEGA SPAVRANAKA RRAERAAARL AAKKDGGAPA PAPAPAQAAL P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60530.1	2e-33	GATA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG055740.2