PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG056040.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1024aa MW: 114779 Da PI: 6.0087

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG056040.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.5	7.2e-55	6	122	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenpt 93 ke ++rwl+++ei++iL+n+++++++ e+++ p sgsl+L++rk++r+frkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een + TRIDC4AG056040.10 6 KEaQTRWLRPTEICEILKNYRNFRIAPEPPNMPASGSLFLFDRKVLRFFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENIN 97 5559************************************************************************************** PP CG-1 94 fqrrcywlLeeelekivlvhylevk 118 fqrr+yw+Lee++ +ivlvhylevk TRIDC4AG056040.10 98 FQRRSYWMLEEDYMHIVLVHYLEVK 122 ********************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1024 aa Download sequence
MEQILKEAQT RWLRPTEICE ILKNYRNFRI APEPPNMPAS GSLFLFDRKV LRFFRKDGHN 60 WRKKKDGKTV KEAHERLKSG SIDVLHCYYA HGEENINFQR RSYWMLEEDY MHIVLVHYLE 120 VKAGKSSSRT RGHDNMLQGA YVDSPLSHLP SQSTDGESSL SGRASEYEAE SDIYSGGAGY 180 HSISRMQQHE NGGGSIIDAS VVSSYSPASS VGNHQGLQAT SPNTGFYSHY QDNSPVIHNE 240 STFGITFNGP STQFDLSSWN EMTKLNKEIH QLPPYQSHVP SEQPPFTEGP GIESFSFDEV 300 YSNGLDIKDD GHADTDREAL WQLPSATDST FATVDNFEQH NKLLEEAINF PVLKTQSSNL 360 SDILKNSFKK SDSFTRWMSK ELAEVDDSQV KFSSGLYWNS EDADNIIGAS SRDQLDQFTL 420 DPMVAQDQLF SITEYFPSWT YAGSKTRVLV TGRFLTSDEV IKLKWSCMFG EVEVPADILA 480 DGTLRCYSPS HKPGRVPFYV TCSNRLACSE VREFEYRPSD SQYMDAPSPH GATNKIYLQA 540 CLDELLSLGR DQQDEFQAAL SNPTKELIDL NKKITSLMTN NDQWSELLKF ADDNQLAPDD 600 RQDQFVESGI KEKLHIWLLH KAGGGGKGPS VLDDEGQGIL HLAAALGYDW AIRPTITAGV 660 SINFRDVHGW TALHWAAFCG RERTVVALIA LGAAPGALTD PRPDFPSGRT PADLASFNGH 720 KGISGFLAEF SLTSHLQTLN LKEAMGSNAS EISGLPGIGD VTGRTASPSA GQGLQAGSMG 780 DPLGAVRNAA QAAARIYQVF RVQSFQRKQA VQYEDDNGVI SDERAMSLLS YKPSKPGQFD 840 PMHAAATRIQ NKFRGWKGRK EFLLIRQRIV KIQAHVRGHQ VRKHYRKIIW SVGIVEKVIL 900 RWRRRGAGLR GFRSTEVATD SSTSSSSVDV IPVKPAEDDY NFLQEGRKQT EERLQRALAR 960 VKSMVQYPEA RDQYQRIMTV VTKMQESQPV EESMLEESTE MDEGFLMSEF KELWDDDMPL 1020 PGYF

Sequence ? help Back to Top

Protein Sequence Length: 1024 aa Download sequence

MEQILKEAQT RWLRPTEICE ILKNYRNFRI APEPPNMPAS GSLFLFDRKV LRFFRKDGHN  60
WRKKKDGKTV KEAHERLKSG SIDVLHCYYA HGEENINFQR RSYWMLEEDY MHIVLVHYLE  120
VKAGKSSSRT RGHDNMLQGA YVDSPLSHLP SQSTDGESSL SGRASEYEAE SDIYSGGAGY  180
HSISRMQQHE NGGGSIIDAS VVSSYSPASS VGNHQGLQAT SPNTGFYSHY QDNSPVIHNE  240
STFGITFNGP STQFDLSSWN EMTKLNKEIH QLPPYQSHVP SEQPPFTEGP GIESFSFDEV  300
YSNGLDIKDD GHADTDREAL WQLPSATDST FATVDNFEQH NKLLEEAINF PVLKTQSSNL  360
SDILKNSFKK SDSFTRWMSK ELAEVDDSQV KFSSGLYWNS EDADNIIGAS SRDQLDQFTL  420
DPMVAQDQLF SITEYFPSWT YAGSKTRVLV TGRFLTSDEV IKLKWSCMFG EVEVPADILA  480
DGTLRCYSPS HKPGRVPFYV TCSNRLACSE VREFEYRPSD SQYMDAPSPH GATNKIYLQA  540
CLDELLSLGR DQQDEFQAAL SNPTKELIDL NKKITSLMTN NDQWSELLKF ADDNQLAPDD  600
RQDQFVESGI KEKLHIWLLH KAGGGGKGPS VLDDEGQGIL HLAAALGYDW AIRPTITAGV  660
SINFRDVHGW TALHWAAFCG RERTVVALIA LGAAPGALTD PRPDFPSGRT PADLASFNGH  720
KGISGFLAEF SLTSHLQTLN LKEAMGSNAS EISGLPGIGD VTGRTASPSA GQGLQAGSMG  780
DPLGAVRNAA QAAARIYQVF RVQSFQRKQA VQYEDDNGVI SDERAMSLLS YKPSKPGQFD  840
PMHAAATRIQ NKFRGWKGRK EFLLIRQRIV KIQAHVRGHQ VRKHYRKIIW SVGIVEKVIL  900
RWRRRGAGLR GFRSTEVATD SSTSSSSVDV IPVKPAEDDY NFLQEGRKQT EERLQRALAR  960
VKSMVQYPEA RDQYQRIMTV VTKMQESQPV EESMLEESTE MDEGFLMSEF KELWDDDMPL  1020
PGYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG056040.10