PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG056040.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1060aa MW: 118601 Da PI: 5.7477

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG056040.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.4	7.5e-55	14	130	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 ke ++rwl+++ei++iL+n+++++++ e+++ p sgsl+L++rk++r+frkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een +f TRIDC4AG056040.8 14 KEaQTRWLRPTEICEILKNYRNFRIAPEPPNMPASGSLFLFDRKVLRFFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENINF 106 5559*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylevk 118 qrr+yw+Lee++ +ivlvhylevk TRIDC4AG056040.8 107 QRRSYWMLEEDYMHIVLVHYLEVK 130 *******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1060 aa Download sequence
YGIAPQLDME QILKEAQTRW LRPTEICEIL KNYRNFRIAP EPPNMPASGS LFLFDRKVLR 60 FFRKDGHNWR KKKDGKTVKE AHERLKSGSI DVLHCYYAHG EENINFQRRS YWMLEEDYMH 120 IVLVHYLEVK AGKSSSRTRG HDNMLQGAYV DSPLSHLPSQ STDGESSLSG RASEYEAESA 180 DIYSGGAGYH SISRMQQHEN GGGSIIDASV VSSYSPASSV GNHQGLQATS PNTGFYSHYQ 240 DNSPVIHNES TFGITFNGPS TQFDLSSWNE MTKLNKEIHQ LPPYQSHVPS EQPPFTEGPG 300 IESFSFDEVY SNGLDIKDDG HADTDREALW QLPSANDGTT TEFLQLPSAI DGRTTEFQLP 360 SATDSTFATV DNFEQHNKLL EEAINFPVLK TQSSNLSDIL KNSFKKSDSF TRWMSKELAE 420 VDDSQVKFSS GLYWNSEDAD NIIGASSRDQ LDQFTLDPMV AQDQLFSITE YFPSWTYAGS 480 KTRVLVTGRF LTSDEVIKLK WSCMFGEVEV PADILADGTL RCYSPSHKPG RVPFYVTCSN 540 RLACSEVREF EYRPSDSQYM DAPSPHGATN KIYLQACLDE LLSLGRDQQD EFQAALSNPT 600 KELIDLNKKI TSLMTNNDQW SELLKFADDN QLAPDDRQDQ FVESGIKEKL HIWLLHKAGG 660 GGKGPSVLDD EGQGILHLAA ALGYDWAIRP TITAGVSINF RDVHGWTALH WAAFCGRERT 720 VVALIALGAA PGALTDPRPD FPSGRTPADL ASFNGHKGIS GFLAEFSLTS HLQTLNLKEA 780 MGSNASEISG LPGIGDVTGR TASPSAGQGL QAGSMGDPLG AVRNAAQAAA RIYQVFRVQS 840 FQRKQAVQYE DDNGVISDER AMSLLSYKPS KPGQFDPMHA AATRIQNKFR GWKGRKEFLL 900 IRQRIVKIQA HVRGHQVRKH YRKIIWSVGI VEKVILRWRR RGAGLRGFRS TEVATDSSTS 960 SSSVDVIPVK PAEDDYNFLQ EGRKQTEERL QRALARVKSM VQYPEARDQY QRIMTVVTKM 1020 QESQPVEESM LEESTEMDEG FLMSEFKELW DDDMPLPGYF

Sequence ? help Back to Top

Protein Sequence Length: 1060 aa Download sequence

YGIAPQLDME QILKEAQTRW LRPTEICEIL KNYRNFRIAP EPPNMPASGS LFLFDRKVLR  60
FFRKDGHNWR KKKDGKTVKE AHERLKSGSI DVLHCYYAHG EENINFQRRS YWMLEEDYMH  120
IVLVHYLEVK AGKSSSRTRG HDNMLQGAYV DSPLSHLPSQ STDGESSLSG RASEYEAESA  180
DIYSGGAGYH SISRMQQHEN GGGSIIDASV VSSYSPASSV GNHQGLQATS PNTGFYSHYQ  240
DNSPVIHNES TFGITFNGPS TQFDLSSWNE MTKLNKEIHQ LPPYQSHVPS EQPPFTEGPG  300
IESFSFDEVY SNGLDIKDDG HADTDREALW QLPSANDGTT TEFLQLPSAI DGRTTEFQLP  360
SATDSTFATV DNFEQHNKLL EEAINFPVLK TQSSNLSDIL KNSFKKSDSF TRWMSKELAE  420
VDDSQVKFSS GLYWNSEDAD NIIGASSRDQ LDQFTLDPMV AQDQLFSITE YFPSWTYAGS  480
KTRVLVTGRF LTSDEVIKLK WSCMFGEVEV PADILADGTL RCYSPSHKPG RVPFYVTCSN  540
RLACSEVREF EYRPSDSQYM DAPSPHGATN KIYLQACLDE LLSLGRDQQD EFQAALSNPT  600
KELIDLNKKI TSLMTNNDQW SELLKFADDN QLAPDDRQDQ FVESGIKEKL HIWLLHKAGG  660
GGKGPSVLDD EGQGILHLAA ALGYDWAIRP TITAGVSINF RDVHGWTALH WAAFCGRERT  720
VVALIALGAA PGALTDPRPD FPSGRTPADL ASFNGHKGIS GFLAEFSLTS HLQTLNLKEA  780
MGSNASEISG LPGIGDVTGR TASPSAGQGL QAGSMGDPLG AVRNAAQAAA RIYQVFRVQS  840
FQRKQAVQYE DDNGVISDER AMSLLSYKPS KPGQFDPMHA AATRIQNKFR GWKGRKEFLL  900
IRQRIVKIQA HVRGHQVRKH YRKIIWSVGI VEKVILRWRR RGAGLRGFRS TEVATDSSTS  960
SSSVDVIPVK PAEDDYNFLQ EGRKQTEERL QRALARVKSM VQYPEARDQY QRIMTVVTKM  1020
QESQPVEESM LEESTEMDEG FLMSEFKELW DDDMPLPGYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG056040.8