PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG056400.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 326aa MW: 35418.9 Da PI: 7.5995

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG056400.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.8	4.5e-14	119	171	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +rr+h ++Er+RR+++N+ ++ Lr+l+P+ + + a+i+ A++Y+k+L+ TRIDC4AG056400.3 119 QRRTHIAVERNRRRQMNEYLAALRSLMPQsY---ERFRGDQASIVGGAINYVKELE 171 79*************************55...8888*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
SHSQAVNLLP LAGARMALEA VVFAQGHFGY GQAPGLGPWC DMVGAGGFLE DCWDQQLLAA 60 PVAPNAEDQW EPVSSWDQSE ASSEGKAAAP EPAMAAAATG RRKRRRTKIV KNKEEVESQR 120 RTHIAVERNR RRQMNEYLAA LRSLMPQSYE RFRGDQASIV GGAINYVKEL EQLLQSLEVQ 180 KSVKNRTGRS PFASSFTFPQ YSTSCNATQA TASDGGSGAD SSGLKSEAGV ADIEVTMVEG 240 HASLKVLSRR RPRQLLRLLA GLQQLRIPPL HLNVTTVDAM VLYSFSLKVE DGSKLSSVED 300 IAAAVHEILA RIQREEEEAG RLSSSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	102	106	RKRRR
2	102	107	RKRRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-50	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG056400.3