PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG057600.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 571aa MW: 59564.1 Da PI: 8.9839

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG057600.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.7	6.7e-30	210	269	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+aed +++++tYeg+Hnh+ TRIDC4AG057600.1 210 MNDGCQWRKYGQKISKGNPCPRAYYRCTIAtGCPVRKQVQRCAEDMSILITTYEGSHNHP 269 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MFVLQIRDDH QASDGNFFKF LQNQSSSKKE AQEDKIASTR AEMGEVRKEN ERLKAMLSRM 60 VDDHRTLQKQ FDVLHQQGRG KNLAVGSVEH TSLVDGVKDP RFISLRLGTS TGTSKHNYMG 120 EEIKGNTNNP DDIAVGARTD GGEIKVRPDV VTLSPGGSSE EEAAETTTTS VASKTEKNPR 180 STDSKDDVAQ QPLAKKARVS VRARCDTPTM NDGCQWRKYG QKISKGNPCP RAYYRCTIAT 240 GCPVRKQVQR CAEDMSILIT TYEGSHNHPL SASATAMAST TSAAASMLMS GSSTSLGFPS 300 AASNLHGLRF GLPAATTVDP LSQLSARPFF LPAAAGTSIS VTPSYPTITL DLTSQAASQQ 360 AFSLSNTNRF SSSFTGSYGH SSSTGTRYPS TSFSFSGSGA SSLPGATAWP AGVGPYLSYG 420 SSPSAPYNDA GKSSFEAALS SINGRQQGSA AFLYQPVQQR AAHVSGGSTA PTVLTDTIAK 480 AITSDPGFHT ALAAAITSYV GKPAAGCGKG LEWGEHLGLG PSSAAAAVCS SAVLARSSST 540 GAAQNGSPND RMTLQASLAL SGSTSATAST L

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MFVLQIRDDH QASDGNFFKF LQNQSSSKKE AQEDKIASTR AEMGEVRKEN ERLKAMLSRM  60
VDDHRTLQKQ FDVLHQQGRG KNLAVGSVEH TSLVDGVKDP RFISLRLGTS TGTSKHNYMG  120
EEIKGNTNNP DDIAVGARTD GGEIKVRPDV VTLSPGGSSE EEAAETTTTS VASKTEKNPR  180
STDSKDDVAQ QPLAKKARVS VRARCDTPTM NDGCQWRKYG QKISKGNPCP RAYYRCTIAT  240
GCPVRKQVQR CAEDMSILIT TYEGSHNHPL SASATAMAST TSAAASMLMS GSSTSLGFPS  300
AASNLHGLRF GLPAATTVDP LSQLSARPFF LPAAAGTSIS VTPSYPTITL DLTSQAASQQ  360
AFSLSNTNRF SSSFTGSYGH SSSTGTRYPS TSFSFSGSGA SSLPGATAWP AGVGPYLSYG  420
SSPSAPYNDA GKSSFEAALS SINGRQQGSA AFLYQPVQQR AAHVSGGSTA PTVLTDTIAK  480
AITSDPGFHT ALAAAITSYV GKPAAGCGKG LEWGEHLGLG PSSAAAAVCS SAVLARSSST  540
GAAQNGSPND RMTLQASLAL SGSTSATAST L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18860.1	2e-53	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG057600.1