PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG057670.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 206aa    MW: 23187.1 Da    PI: 10.4386
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG057670.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.79.3e-161675155
               AP2  1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
                      s+++GV++++++gr++A+++d  ++n    k+ k+++lg +  +e Aa+a++ a++k++g
  TRIDC4AG057670.1 16 SRFRGVSRHRWTGRFEAHLWDkGTWNPtqkKKgKQVYLGAYNEEEAAARAYDLAALKYWG 75
                      789******************888855566447*************************98 PP
2AP253.84.7e-17118169155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa+a++ a+ +++g
  TRIDC4AG057670.1 118 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 169
                       89****99**********99966...3.6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
AGDKLVGGNA AAKRSSRFRG VSRHRWTGRF EAHLWDKGTW NPTQKKKGKQ VYLGAYNEEE  60
AAARAYDLAA LKYWGPTTYT NFPVVDYEKE LKVMQGVSRE EYLASIRRKS NGFSRGVSKY  120
RGVARHHHNG RWEARIGRVF GNKYLYLGTY STQEEAARAY DIAAIEYRGI NAVTNFDLST  180
YIRWLKPGAA PAEAMSGLSG APSPRI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14250PTQKKKGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.31e-85AP2 family protein