PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG057710.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Whirly
Protein Properties Length: 256aa    MW: 28301.4 Da    PI: 8.842
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG057710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly192.56.3e-60932311139
            Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrka 93 
                       s+yk+kaal  +++ p+f+ l+sg+ k+ ++G++ll++a+a+++r+ydW +kq+f+ls+ e+++l+ l+  +sceffhdp+++ s+eGkvrk+
  TRIDC4AG057710.1  93 SIYKGKAALAFDPRPPQFVPLESGAYKVAKEGFVLLQFAPAVGPRQYDWTRKQVFSLSVWEMGTLLTLGLTDSCEFFHDPFKGRSDEGKVRKV 185
                       7******************************************************************************************** PP

            Whirly  94 lkvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                       lkveP pdG G f+nlsv+n l++++e++++P++k+e+av+ s ++
  TRIDC4AG057710.1 186 LKVEPTPDGNGRFFNLSVQNRLLNVDENIYIPITKGEYAVIVSTFN 231
                       *****************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MPPPLSVSLP SPQPLSLLPR HARGPHPHSI ALAQPLSSRA PPASACSVVP ARHSDYFDPR  60
APPSQRDAYG QPPLERDPPV PGGQAGRVFA SYSIYKGKAA LAFDPRPPQF VPLESGAYKV  120
AKEGFVLLQF APAVGPRQYD WTRKQVFSLS VWEMGTLLTL GLTDSCEFFH DPFKGRSDEG  180
KVRKVLKVEP TPDGNGRFFN LSVQNRLLNV DENIYIPITK GEYAVIVSTF NKSHCVLTYD  240
MGYFPPRLCM EEHVSM