PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG057710.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Whirly
Protein Properties Length: 161aa    MW: 18475 Da    PI: 7.5052
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG057710.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly171.61.8e-53112416139
            Whirly  16 ptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpdGsGlfvn 108
                       p+f+ l+sg+ k+ ++G++ll++a+a+++r+ydW +kq+f+ls+ e+++l+ l+  +sceffhdp+++ s+eGkvrk+lkveP pdG G f+n
  TRIDC4AG057710.2   1 PQFVPLESGAYKVAKEGFVLLQFAPAVGPRQYDWTRKQVFSLSVWEMGTLLTLGLTDSCEFFHDPFKGRSDEGKVRKVLKVEPTPDGNGRFFN 93 
                       78999**************************************************************************************** PP

            Whirly 109 lsvtnslvkgnesfsvPvskaefavlrsllv 139
                       lsv+n l++++e++++P++k+e+av+ s ++
  TRIDC4AG057710.2  94 LSVQNRLLNVDENIYIPITKGEYAVIVSTFN 124
                       **************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
PQFVPLESGA YKVAKEGFVL LQFAPAVGPR QYDWTRKQVF SLSVWEMGTL LTLGLTDSCE  60
FFHDPFKGRS DEGKVRKVLK VEPTPDGNGR FFNLSVQNRL LNVDENIYIP ITKGEYAVIV  120
STFNYIIPHI MGWSTFTNSI KPEESQPYNR PQSSPELEWR R