PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG057710.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Whirly
Protein Properties Length: 125aa    MW: 14454.4 Da    PI: 6.526
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG057710.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly1162.6e-3618852139
            Whirly  52 kqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                       +q+f+ls+ e+++l+ l+  +sceffhdp+++ s+eGkvrk+lkveP pdG G f+nlsv+n l++++e++++P++k+e+av+ s ++
  TRIDC4AG057710.3   1 RQVFSLSVWEMGTLLTLGLTDSCEFFHDPFKGRSDEGKVRKVLKVEPTPDGNGRFFNLSVQNRLLNVDENIYIPITKGEYAVIVSTFN 88 
                       589********************************************************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
RQVFSLSVWE MGTLLTLGLT DSCEFFHDPF KGRSDEGKVR KVLKVEPTPD GNGRFFNLSV  60
QNRLLNVDEN IYIPITKGEY AVIVSTFNYI IPHIMGWSTF TNSIKPEESQ PYNRPQSSPE  120
LEWRR