PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG059520.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 151aa MW: 16418.9 Da PI: 10.4163

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG059520.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	35.6	1.6e-11	4	28	32	56
HHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 32 eLAkklgLterqVkvWFqNrRakek 56 LA++lgL rqV vWFqNrRa+ k TRIDC4AG059520.2 4 ALANSLGLRPRQVEVWFQNRRARTK 28 79*********************98 PP
2	HD-ZIP_I/II	87.5	1.7e-28	1	64	28	92
HD-ZIP_I/II 28 rKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e++kr++++l+e+n+rLekev+eLr +lk TRIDC4AG059520.2 1 QKLALANSLGLRPRQVEVWFQNRRARTKLKQTEVDCEYMKRWCEQLAEQNRRLEKEVAELR-ALK 64 799*********************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 151 aa Download sequence
QKLALANSLG LRPRQVEVWF QNRRARTKLK QTEVDCEYMK RWCEQLAEQN RRLEKEVAEL 60 RALKATPPAH NGAAAGPLTT LTMCLSCKRV ASTSSASACT VPSFSANAGI GMPMPSPVAQ 120 PEHRQFFCGF RDTGAAYGGP AGLTKVVKAA R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	23	31	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	3e-38	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG059520.2