PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG061060.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 274aa    MW: 31969.6 Da    PI: 8.107
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG061060.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.89.7e-105504791
              FAR1 47 ktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                       +++++r+r+ tr+gC+ kl++++++ +g w v+++  eH+H+lap
  TRIDC4AG061060.1  5 MEDRKKRPRSLTRVGCNDKLVITRQEeTGMWFVKDFIDEHSHPLAP 50
                      347899*******************99****************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MKRKMEDRKK RPRSLTRVGC NDKLVITRQE ETGMWFVKDF IDEHSHPLAP RDLSCLLRSH  60
RRISDEQKVD IADMEKCGIR KYRIMDILCF QYGGFDKFGC IKRDIYNFCH ANKQETISAG  120
DANTVIMHMM ARRERDVDFF FKYLVDEHGH LKGLLRADSQ SRLDYEAFGD VIVFDSTYRT  180
DKYNLPFVPF VGLNHHRSTV IFGCGIISHE TSQAYEWMLR TFSDCMAQKH PISVITDGAL  240
QCREQSGWSG QTQTIDYVYG TFSRTLYAIC MMTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-51FAR1 family protein