PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG062360.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 396aa MW: 42857.9 Da PI: 7.2405

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG062360.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162	2.3e-50	11	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +ppGfrFhPt+eel+++yL+kkv++++++l +vi++vd++k+ePwd+++ ++ + +++wy Fs++dkky+tg+r+nrat++g+Wkatg+dk TRIDC4AG062360.1 11 VPPGFRFHPTEEELLTYYLAKKVASQRIDL-DVIPDVDLNKLEPWDIQErcRIGTgPQNDWYLFSHKDKKYPTGTRTNRATTAGFWKATGRDK 102 69**************************.9***********953444442456****************************** PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++s+ ++ +g++ktLv+ykgrap+g+k+dW+mheyrl TRIDC4AG062360.1 103 AIYSAaGSGRIGMRKTLVYYKGRAPHGHKSDWIMHEYRL 141 977788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MSISVNGQSV VPPGFRFHPT EEELLTYYLA KKVASQRIDL DVIPDVDLNK LEPWDIQERC 60 RIGTGPQNDW YLFSHKDKKY PTGTRTNRAT TAGFWKATGR DKAIYSAAGS GRIGMRKTLV 120 YYKGRAPHGH KSDWIMHEYR LDDAVAPPTN PVFAAGDASS YVHDMAGGQS SSTQEDGWVI 180 CRVFKKKNIV VQHQAGQSGG GRGAASNKLV GAGAMEHSQS NCSSTVTPAS ANAKAQMQQH 240 LPHSDDALDH ILNYMGRSST ASCRQETKPP NPSSSALDHL INSACRNGTS TLYDKFMKLP 300 PLQHVVPGGL LPPPNEYGRD WDALDRLAAY ELNGLSNPAL AETTTDMSYI ADELGGVTSY 360 SAGGTLHTPS VTVAGDGDLW SLARPVSSLH ADLTMT

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MSISVNGQSV VPPGFRFHPT EEELLTYYLA KKVASQRIDL DVIPDVDLNK LEPWDIQERC  60
RIGTGPQNDW YLFSHKDKKY PTGTRTNRAT TAGFWKATGR DKAIYSAAGS GRIGMRKTLV  120
YYKGRAPHGH KSDWIMHEYR LDDAVAPPTN PVFAAGDASS YVHDMAGGQS SSTQEDGWVI  180
CRVFKKKNIV VQHQAGQSGG GRGAASNKLV GAGAMEHSQS NCSSTVTPAS ANAKAQMQQH  240
LPHSDDALDH ILNYMGRSST ASCRQETKPP NPSSSALDHL INSACRNGTS TLYDKFMKLP  300
PLQHVVPGGL LPPPNEYGRD WDALDRLAAY ELNGLSNPAL AETTTDMSYI ADELGGVTSY  360
SAGGTLHTPS VTVAGDGDLW SLARPVSSLH ADLTMT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	5e-91	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG062360.1