PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG062370.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 368aa MW: 39922.6 Da PI: 7.4951

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG062370.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.7	2.8e-50	11	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +ppGfrFhPt+eel+++yL+kkv++++++l +vi++vd++k+ePwd+++ ++ + +++wy Fs++dkky+tg+r+nrat++g+Wkatg+dk TRIDC4AG062370.1 11 VPPGFRFHPTEEELLTYYLAKKVASQRIDL-DVIPDVDLNKLEPWDIQErcRIGTgPQNDWYLFSHKDKKYPTGTRTNRATAAGFWKATGRDK 102 69**************************.9***********953444442456****************************** PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++s+ ++ +g++ktLvfykgrap+g+k+dW+mheyrl TRIDC4AG062370.1 103 GIYSAaGSGRIGMRKTLVFYKGRAPHGHKSDWIMHEYRL 141 977788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MSISVNGQSV VPPGFRFHPT EEELLTYYLA KKVASQRIDL DVIPDVDLNK LEPWDIQERC 60 RIGTGPQNDW YLFSHKDKKY PTGTRTNRAT AAGFWKATGR DKGIYSAAGS GRIGMRKTLV 120 FYKGRAPHGH KSDWIMHEYR LDDAVAAATS LVFAAGDASS YYSGISSPSP PAQEDGWVIC 180 RVFRKKNIVV QHQNGGGAAS NKLVGAGAME YSQSNCSSAV TAASDKAKAH MHQQQHLPHS 240 DDALDHILSY MGRSSTASCK QETKPTNPSS SALDHLINGA CHSGSSTLQY DKFMKLPPLE 300 HVVPGGLLPP PAEYGRDWDD LDRLAAYELN GLSHPASANT TNSMSYIADE LGGTTSYSGG 360 GTLHILHS

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MSISVNGQSV VPPGFRFHPT EEELLTYYLA KKVASQRIDL DVIPDVDLNK LEPWDIQERC  60
RIGTGPQNDW YLFSHKDKKY PTGTRTNRAT AAGFWKATGR DKGIYSAAGS GRIGMRKTLV  120
FYKGRAPHGH KSDWIMHEYR LDDAVAAATS LVFAAGDASS YYSGISSPSP PAQEDGWVIC  180
RVFRKKNIVV QHQNGGGAAS NKLVGAGAME YSQSNCSSAV TAASDKAKAH MHQQQHLPHS  240
DDALDHILSY MGRSSTASCK QETKPTNPSS SALDHLINGA CHSGSSTLQY DKFMKLPPLE  300
HVVPGGLLPP PAEYGRDWDD LDRLAAYELN GLSHPASANT TNSMSYIADE LGGTTSYSGG  360
GTLHILHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	6e-87	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG062370.1