PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG062440.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 312aa    MW: 35605.2 Da    PI: 11.0071
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG062440.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.33.7e-50111421129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                       +ppGfrFhPt+eel+++yL+kkv++++++l +vi+++d++k+ePwd+++  ++ +  +++wy Fs++dkky+ g+r+nrat++g+Wkatg+dk
  TRIDC4AG062440.3  11 VPPGFRFHPTEEELLTYYLAKKVASQRIDL-DVIPDIDLNKLEPWDIQErcRIGTgPQNDWYLFSHKDKKYPMGTRTNRATAAGFWKATGRDK 102
                       69****************************.9***************953444442456********************************** PP

               NAM  91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                       +++s+ ++  +g++ktLvfykgrap+g+k+dW+mheyrle
  TRIDC4AG062440.3 103 AIYSAaGSGRIGMRKTLVFYKGRAPHGRKSDWIMHEYRLE 142
                       ****977788****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MSISVNGQSV VPPGFRFHPT EEELLTYYLA KKVASQRIDL DVIPDIDLNK LEPWDIQERC  60
RIGTGPQNDW YLFSHKDKKY PMGTRTNRAT AAGFWKATGR DKAIYSAAGS GRIGMRKTLV  120
FYKGRAPHGR KSDWIMHEYR LEDAVPVNPG DATYYSNTRR GWRPVVDAGG RVGHLSGVQE  180
EEHRRATPSW PEPWRWRRSV QQASRRRCHG AQPEQLLVDV GRRQRPRQGA DDALLRQRRR  240
ARPHPQLHGP LIHDIVQAGD QAHQPIVVST GPPDQQSVPQ RQQHPVRQVH EAPAARARRA  300
WPAPTATARV QW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1227239RQGADDALLRQRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.12e-86NAC family protein