PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG063790.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 228aa    MW: 24647.5 Da    PI: 12.3494
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG063790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.72.5e-174091155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      + y+GVr++   grWv+e+r ps+   + r++lg+f ++e Aa+a++ a+++l+g
  TRIDC4AG063790.1 40 PVYRGVRRRGAAGRWVCEVRQPSK---KSRIWLGTFASPEAAARAHDVAALALHG 91
                      68****************999854...6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MDRCGAGLYG VVDGGGYATV TSAPPKRPAG RTKFRETRHP VYRGVRRRGA AGRWVCEVRQ  60
PSKKSRIWLG TFASPEAAAR AHDVAALALH GRAACLNFAD SAALLAVDPA TLRTPQDIRA  120
AAMALARAAC PHDGAPSSAS ALQAASAPAP AMVMMQDAAA APVRQLRHVR RLGGPGPAFP  180
LLLRRDERLR RRLAKHRAHE RSRRGRQLRR RRRRALELLI ASGRSSSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190212RRRLAKHRAHERSRRGRQLRRRR
2206214RQLRRRRRR
3209214RRRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.18e-26ERF family protein