PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG066840.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 123aa    MW: 13956.3 Da    PI: 10.8435
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG066840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF27.25.1e-094283344
                      --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
            SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                      i ++  r  +f kR  g++K A  L  L++a+va+i+  s+g
  TRIDC4AG066840.1 42 IHDDKERDGSFFKRPSGLFKSAANLNALTGARVAIILEVSNG 83
                      889999******************************877766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
NGFGKSLAFR RFLLLLFIVV SFIFIIGFSM PRRERRSGVA YIHDDKERDG SFFKRPSGLF  60
KSAANLNALT GARVAIILEV SNGFMLFQTN HPTMDFLGWM LNWVMMVLSR HSSIGNGECV  120
YAQ