PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG069320.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 189aa    MW: 21032.7 Da    PI: 8.4842
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG069320.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.64.3e-115195147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       r +WT  E++++++a  ++  + W++I + +g  +t  q++s+ qky
  TRIDC4AG069320.10 51 RESWTDPEHDKFIEALLLFDRD-WRKIEAFVG-SKTVIQIRSHAQKY 95
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
LHSIPQQTPA TEIGSERAMA AVMESSSVPG VDGGEGAEGR VRKPYTITKS RESWTDPEHD  60
KFIEALLLFD RDWRKIEAFV GSKTVIQIRS HAQKYFLKVQ KNGTGEHLPP PRPKRKAAHP  120
YPHNKASKKA PEVDLPQQPP HVVEQGRVIP MDAPTVATNS SANEDTFPSW DDVLTQPYSP  180
RHTQGLQLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.13e-41MYB_related family protein