PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG069320.14
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 257aa    MW: 28886.3 Da    PI: 5.9454
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG069320.14genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.97.2e-111559147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       r +WT  E++++++a  ++  + W++I + +g  +t  q++s+ qky
  TRIDC4AG069320.14 15 RESWTDPEHDKFIEALLLFDRD-WRKIEAFVG-SKTVIQIRSHAQKY 59
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
AEGRVRKPYT ITKSRESWTD PEHDKFIEAL LLFDRDWRKI EAFVGSKTVI QIRSHAQKYF  60
LKVQKNGTGE HLPPPRPKRK AAHPYPHNKA SKKAPEVDLP QQPPHVVEQG RVIPMDAPTV  120
ATNSSANEDT FPSWDDVLTQ PYSPRHTQDL GTANNSSSSI ECQSGTWPAS DAIEQEIWPT  180
SDAIEQEIVL PALHAMPDFA QVYNFLGGVF DPDTTGHLQK LREMDPIDAE TVLQLMKNLS  240
VNLSSPDFET HLSIQHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-70MYB_related family protein