PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG070120.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 236aa MW: 28008 Da PI: 8.7965

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG070120.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.4	5.6e-24	28	122	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YA e GFsvrks+ + n+ i+ r+ vCs++g+re+++ k ++++rr+r+ t +gC+ kl++++++ +g+w v+++ eH+H+l TRIDC4AG070120.1 28 EFYNKYALEKGFSVRKSYVEWDGSNKYIILRKIVCSRQGFREDKHMKrkmEDRKRRPRSLTPVGCNSKLVITRQEeTGRWFVKDFIDEHSHPL 120 6****************************************9998888899999**************99**************9 PP FAR1 90 ap 91 ap TRIDC4AG070120.1 121 AP 122 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MAYASDESMF EYVNVVSKMF DSEAEGYEFY NKYALEKGFS VRKSYVEWDG SNKYIILRKI 60 VCSRQGFRED KHMKRKMEDR KRRPRSLTPV GCNSKLVITR QEETGRWFVK DFIDEHSHPL 120 APRDLSCQLR SHRRISDEQK ADIADMEKCG IRKYRIMDIL CFQYGGFDKV GCIYNFCHAN 180 KQETISAGDA KTVIMHMMAR RERDVDFFFK YLVDKHVHLK GLFWADSQSR LDYEAF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	79	84	DRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-33	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG070120.1