PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG071530.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 258aa    MW: 28363.7 Da    PI: 6.401
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG071530.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS228.33.7e-7072581263
              GRAS   1 lvelLlecAeavssgdle.laqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsP 89 
                       l+elL++cA+a++ +d + +a+a+L++l++  + ++g+p+qRl ay++e+Laarla       k+ + +et    s+e+++++k   +  ++P
  TRIDC4AG071530.1   7 LKELLIACATAIEGEDRSmKADAMLEELRKSvSVSAGEPLQRLGAYMVEGLAARLAC------KKPKGRET----STEQIMYDKEtlYEACCP 89 
                       5799**********998879***********455667*******************8......44444444....4566666554448889** PP

              GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
                       ++k ++ +aN aI eave++++vHiiDf is G QW+ +++aL++R +gpp++RiTg++++ +   +  +le+t  rL+  A ++gvp+ef++
  TRIDC4AG071530.1  90 YFKGGYGAANAAIIEAVERQDKVHIIDFRISAGHQWVHIIRALSKRVGGPPTIRITGIDDSVPAyaRGSMLEQTSMRLRFSAVKFGVPMEFHA 182
                       ************************************************************88878899************************* PP

              GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealey 263
                        va + e++e  +L+v pgEal+Vn+ l lh ++      e++rd++L+lvkslsPkvv++veqe+d+++++F++rf+e+l+y
  TRIDC4AG071530.1 183 -VAISGEQVEEGHLAVVPGEALVVNFNLGLHCIP------EDHRDRILRLVKSLSPKVVTLVEQELDTSTGPFMQRFVETLDY 258
                       .6889****************************9......7789*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MTGGSNLKEL LIACATAIEG EDRSMKADAM LEELRKSVSV SAGEPLQRLG AYMVEGLAAR  60
LACKKPKGRE TSTEQIMYDK ETLYEACCPY FKGGYGAANA AIIEAVERQD KVHIIDFRIS  120
AGHQWVHIIR ALSKRVGGPP TIRITGIDDS VPAYARGSML EQTSMRLRFS AVKFGVPMEF  180
HAVAISGEQV EEGHLAVVPG EALVVNFNLG LHCIPEDHRD RILRLVKSLS PKVVTLVEQE  240
LDTSTGPFMQ RFVETLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.14e-80GRAS family protein