PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG072000.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 336aa    MW: 39025.7 Da    PI: 6.7425
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG072000.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM176.76.3e-5591391129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                       +ppGfrFhPtdeelv++yL+kkv++++++l +vik+vd+yk+ePwdL++      ++e+++wyfFs++dkky+tg+r+nrat++g+Wkatg+d
  TRIDC4AG072000.2   9 VPPGFRFHPTDEELVDYYLRKKVASRRIDL-NVIKDVDLYKIEPWDLQEkcriGPEEEQSDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRD 100
                       69****************************.99**************95343322335669******************************** PP

               NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                       k++++ k+ lvg++ktLv+ykgrap+g+k+dW+mheyrle
  TRIDC4AG072000.2 101 KPIYA-KHCLVGMRKTLVYYKGRAPNGQKSDWIMHEYRLE 139
                       *****.899*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MGSNTQPQVP PGFRFHPTDE ELVDYYLRKK VASRRIDLNV IKDVDLYKIE PWDLQEKCRI  60
GPEEEQSDWY FFSHKDKKYP TGTRTNRATA AGFWKATGRD KPIYAKHCLV GMRKTLVYYK  120
GRAPNGQKSD WIMHEYRLET NENGPPQEEG WVVCRVFKKR LPTTRRDLDH DAPCWYVDDD  180
GPFMHDLNSP MRGMPPHHSM ALQEQHLQML NSTYKRELKL QYQMPNHHHV LNTIPHELES  240
PSSFHSLLVS PDDHQINVHH AQHHHVQLID HAVDDQAATD WRVLDKFVAS QLSNDAAKGV  300
DYAHEGDILQ LNEKAQELVT DYASTSTSSS QVDPWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-104NAC family protein