PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG000280.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 145aa    MW: 15936.8 Da    PI: 4.8573
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG000280.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB43.95.9e-14351052696
             NF-YB  26 kiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                        + kda     e +  fi ++++ a+d c+  kr+tin++d++ al ++ f ++vepl++ l+++r  +++
  TRIDC4BG000280.2  35 IVNKDAMAAFAEGARIFIHYLSATANDVCKDGKRQTINAEDVFKALDEIEFPEFVEPLRTALEEFRSRNAA 105
                       4789999999********************************************************87665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
EVEELPKAIV RRLVKDKLAR AASGGEGAEG GAEVIVNKDA MAAFAEGARI FIHYLSATAN  60
DVCKDGKRQT INAEDVFKAL DEIEFPEFVE PLRTALEEFR SRNAARKPAS GKKQSEKKRK  120
LDKEAVPEEQ NGAADEANAD KDEFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.12e-33NF-YB family protein