PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG001310.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 369aa    MW: 40266.7 Da    PI: 5.7477
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG001310.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26.2e-054970223
                      EETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                      kC +C++ F ++  L+rH r+H
  TRIDC4BG001310.2 49 KCAKCPREFCSSVALRRHTRVH 70
                      7*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
GSVSGQIQPP KIPDAVVALA QAAAKANNNS NNNLPGWPLF SPPKMQLTKC AKCPREFCSS  60
VALRRHTRVH RRALKIDKDF PKNRDHLAAF WDKLTVGQAQ AILSLEGVAI EETSALFILT  120
SLSSWMCKPG YASLPLPYAR AGNELLDLIQ TAASRLPISS NELFIMFDEA SENTFLCTDA  180
ACVQKFLFDG EVEKVATELK NVVACTSYIL EQKLVEAWSA DKAAEALRCQ KLLVEEEDAA  240
QKRQAEIMER KRMKKLRQKE QRLKDLKDEG TTVQLPEVVD GATGSPGIES LEAVSGPGLH  300
EQEDPQYLQL SAPVPPSEDN ACNGEDAGAV FREQAMATAN LDRVENLPQN SSASASSVTA  360
SKHPSSVRH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1249256ERKRMKKL
2254264KKLRQKEQRLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25610.12e-82C2H2 family protein