PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG002480.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 889aa MW: 98451.3 Da PI: 6.9758

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG002480.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	96.6	2.8e-30	75	183	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkaklkvkkekdgk 75 fYn YA++vGFs+r+s +++s+r+g+i++r+fvC keg+r+ + k+ + rrtra+tr+gCka+++vkk++ gk TRIDC4BG002480.2 75 FYNLYAHRVGFSTRISVMHRSRRDGSIMSRQFVCAKEGFRTYRGKHeqaaalasspggpagaddgGRGGRRTRAVTRVGCKAMIRVKKQDGGK 167 *****************************************9999***********9998999******************** PP FAR1 76 wevtkleleHnHelap 91 w +tkle+ HnH+l+p TRIDC4BG002480.2 168 WAITKLETAHNHPLVP 183 ***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 889 aa Download sequence
MERVAAGSSE QGTPDSEMGD GDNDSVGYGT EMELDPAPTP GSAPAAAYPA RPSVHDGVDP 60 FEGMEFDDEE DAWTFYNLYA HRVGFSTRIS VMHRSRRDGS IMSRQFVCAK EGFRTYRGKH 120 EQAAALASSP GGPAGADDGG RGGRRTRAVT RVGCKAMIRV KKQDGGKWAI TKLETAHNHP 180 LVPQNQAHCL RPHKPLSECG KQRSSSSYGV RRNGGMFLAI EPPTPPTPPV PQTSIIPQPA 240 VVPHYITDGI GNATRVILDY VKRMQAEDPA FFYAMQFVEG HPVGNVFWSD ARARTAYKDF 300 GDAVFLDDHC KRSKYELPLV TFTGVNHHCQ PVLFGCAVIR DNSEASFAWL FETLLLAMSG 360 QHPVSLTTEY DGAIQSAVHK VLPHTRHRFC RWHILNEAQG KLSDFLNAFP AFYDDFVNCI 420 NMSETIDEFE ANWEALISKV GSGHNEWLDS MYNCRQQWVP VYLRDTFFGD EPSRQGCMSR 480 SSFFESHITA KTDSQSFIQQ YEKALDSCYE REVKEEFETK YSLPDIKTPS PIEKQGADLY 540 TRMLFLRFQQ EVIGASVSTL EVAEEHGKAC TYKVTTSQGS EKPRMVQFNS SDSSAKCTCQ 600 MFECLGIACR HILTVFGAQG VSTLPSQYIM KRWTKNATDR SSDKKPDEVV RVKELKEQRS 660 STVEDGEQSQ TWRYNNLCRE ALRYAEEGAS SVEVYIVAMQ ALQEAANKVN MAKRGIGQVA 720 APLAVMPITA QLPECSGKIQ DSFGQQKKRK RNSNNPRENS APNQFMHMQQ PSNHLFVGPS 780 TSGGSQGHSQ LVAAIPVSSY AQHGQTSGAH NSTDGNMATA SVAVDKFHGF SDRDASTTAP 840 SSGNVVQAGE TKSSGVASQI NEHFSRQLKK NEVIMFSCKR PVHVQIYLE

Sequence ? help Back to Top

Protein Sequence Length: 889 aa Download sequence

MERVAAGSSE QGTPDSEMGD GDNDSVGYGT EMELDPAPTP GSAPAAAYPA RPSVHDGVDP  60
FEGMEFDDEE DAWTFYNLYA HRVGFSTRIS VMHRSRRDGS IMSRQFVCAK EGFRTYRGKH  120
EQAAALASSP GGPAGADDGG RGGRRTRAVT RVGCKAMIRV KKQDGGKWAI TKLETAHNHP  180
LVPQNQAHCL RPHKPLSECG KQRSSSSYGV RRNGGMFLAI EPPTPPTPPV PQTSIIPQPA  240
VVPHYITDGI GNATRVILDY VKRMQAEDPA FFYAMQFVEG HPVGNVFWSD ARARTAYKDF  300
GDAVFLDDHC KRSKYELPLV TFTGVNHHCQ PVLFGCAVIR DNSEASFAWL FETLLLAMSG  360
QHPVSLTTEY DGAIQSAVHK VLPHTRHRFC RWHILNEAQG KLSDFLNAFP AFYDDFVNCI  420
NMSETIDEFE ANWEALISKV GSGHNEWLDS MYNCRQQWVP VYLRDTFFGD EPSRQGCMSR  480
SSFFESHITA KTDSQSFIQQ YEKALDSCYE REVKEEFETK YSLPDIKTPS PIEKQGADLY  540
TRMLFLRFQQ EVIGASVSTL EVAEEHGKAC TYKVTTSQGS EKPRMVQFNS SDSSAKCTCQ  600
MFECLGIACR HILTVFGAQG VSTLPSQYIM KRWTKNATDR SSDKKPDEVV RVKELKEQRS  660
STVEDGEQSQ TWRYNNLCRE ALRYAEEGAS SVEVYIVAMQ ALQEAANKVN MAKRGIGQVA  720
APLAVMPITA QLPECSGKIQ DSFGQQKKRK RNSNNPRENS APNQFMHMQQ PSNHLFVGPS  780
TSGGSQGHSQ LVAAIPVSSY AQHGQTSGAH NSTDGNMATA SVAVDKFHGF SDRDASTTAP  840
SSGNVVQAGE TKSSGVASQI NEHFSRQLKK NEVIMFSCKR PVHVQIYLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-163	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG002480.2