PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG002800.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 202aa    MW: 21806 Da    PI: 9.9987
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG002800.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260141.13.7e-44421411100
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       +CaaCk+lrr+C+++Cv+apyfp+ +p++fa vhk+FGasn++kll+++p e+r da+sslvyeA+ar+rdP+yG+vg i++lq+q+e+l+++
  TRIDC4BG002800.1  42 PCAACKLLRRRCSPGCVFAPYFPSGEPHRFASVHKVFGASNISKLLQEIPAEHRGDAVSSLVYEANARVRDPIYGCVGAITSLQRQVESLQTQ 134
                       7******************************************************************************************** PP

            DUF260  94 lallkee 100
                       lal+++e
  TRIDC4BG002800.1 135 LALAQAE 141
                       ***9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
GIILHSTYVP VHLLSSPLRI WRRKKRRGGM KEVAAGGAGV SPCAACKLLR RRCSPGCVFA  60
PYFPSGEPHR FASVHKVFGA SNISKLLQEI PAEHRGDAVS SLVYEANARV RDPIYGCVGA  120
ITSLQRQVES LQTQLALAQA EMVRLRMADA YGGTARRGGG STASGSPSSM SSPTKTADRH  180
DMAVDQSGVM ELELECSRFW SF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.13e-57LBD family protein