PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG003610.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 215aa    MW: 23050.1 Da    PI: 10.9308
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG003610.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.52.4e-08141181954
                       HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  TRIDC4BG003610.1 141 ARLRRERISERIRVLQRLVPGG-----TKMDTASMLDEAIHYVKFL 181
                       699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
RAPPPPQEAA ARCTTDSAQC NGTGEARWAT PPLAEAAAAA HAAPRPTAAS SREARRGPGR  60
HRVRRQRACV HQEYVVSPGA AVFDGAGGTP QGYSSPSSSD AMREMIFHIA ALQPVEVDPE  120
AVRPPKRRNV RTSKDPQSVA ARLRRERISE RIRVLQRLVP GGTKMDTASM LDEAIHYVKF  180
LKSQVQSLEL AAAATGAAAH RAAAFAYPAL QHAPW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123128RPPKRR
2142147RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.14e-42bHLH family protein