PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG003610.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 120aa    MW: 13320.5 Da    PI: 11.4165
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG003610.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH277.9e-094686954
                      HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                       r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  TRIDC4BG003610.2 46 ARLRRERISERIRVLQRLVPGG-----TKMDTASMLDEAIHYVKFL 86
                      699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MRAPGAMREM IFHIAALQPV EVDPEAVRPP KRRNVRTSKD PQSVAARLRR ERISERIRVL  60
QRLVPGGTKM DTASMLDEAI HYVKFLKSQV QSLELAAAAT GAAAHRAAAF AYPALQHAPW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12833RPPKRR
24752RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.11e-42bHLH family protein